Protein ZmHAG10 | |
---|---|
Information | |
Coreg Name: | ZmHAG10 |
Species: | Maize |
Coreg Family: | GNAT |
Gene Name(Synonym): | |
Uniprot ID: | Q94F76 |
Subgenome: | 1 |
ZmHAG10 is a protein in the GNAT family.
Overview of domains present in v5 transcripts | ||||
---|---|---|---|---|
PF00583 | PF08445 | PF13508 | PF13673 | |
Zm00001eb069290_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d002156 | DAPseq | sequence | fimo | position | |
Zm00001d002156 | DAPseq | sequence | fimo | position | |
Zm00001d002156 | ChIPseq | sequence | fimo | position | |
Zm00001d002156 | PChIPseq | sequence | fimo | position |
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF13673 |
|
PF00583 |
|
PF13508 |
|
PF08445 |
|
Hover here to show all domains |
GGCCCACAGGCCTAATTCGGCCGGT...
GGCCCACAGGCCTAATTCGGCCGGTTTTCCATCTAGGGTTAGGTCAAGGCCTCCCCGAGCCTCTCTATATGAACGGAGACAAGGCAGCCGCCGCCGTCCCCATTAACATCACCGAGACCTATCGCCGCAGAACCACCGAATCCACGGCATCGGAGAGTGTAGAGGTTAGTACTAGGCGGAGGTCAAGATGGTGTGCATCCGGCAGGCGACTATCGACGACCTGCTGGCGATGCAGGCGTGCAACTTGATGTGCCTGCCGGAGAACTACCAGATGAAGTACTACCTCTACCACATGCTGTCTTGGCCGCAGCTCCTCTTCGTCGCCGAGGACTACGGCGGCCGCATCGTCGGCTACGTGCTCGCCAAGATGGAGGAGGACCCCTCCGAGCCCTGCCACGGCCACATCACCTCCCTCGCGGTGCTCCGCTCCCACCGCAAGCTCGGGCTCGCCACCAAGCTCATGTCCGCCGCGCAGGCAGCCATGGACCAGGTCTTCGGCGCCGAGTACGTCTCCCTCCACGTCCGCCGATCCAACCGCGCCGCCTTCAACCTCTACACCTCCACTCTCGGGTACCAGATCCACGACATCGAGGCCAAGTACTACGCCGATGGAGAGGACGCGTTCGACATGCGCAAGCCTCTCCGGCAGCCGCAACCTAAGAAGCACCACCATCACCACCACCACGGCCCCGGTGGGTGCTGCTCCCACGACGCACCTACGGCGACGACTGGTTCTTCTCCTCAGTCTTTTAGTTCGCCGGATAAGAAGGCTAACACTTGACGGATGAAGCATATCTACAGAGAGGAGTCACCAAGCCCATTGGACTTCCGATACGCAGCTTTTTCTAATAGAATGGGAAACGAATTGTACTGTAATTGTTTGTGTACTTTACTTTGGCTCAATCGTCCGACCGTATCTTTGTAATCAGTGAGAATGGCAAGCAAATGTCCTTGACATCTATTGTTATTGTAAAAACATGTGTTATAACGCTGATTCTCAGATTACATTTGATTATTCGAGCTGACAATTTCTTCAGGTTTTATACAGC
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
GACAAGGCAGCCGCCGCCGTCCCCA...
GACAAGGCAGCCGCCGCCGTCCCCATTAACATCACCGAGACCTATCGCCGCAGAACCACCGAATCCACGGCATCGGAGAGTGTAGAGGTTAGTACTAGGCGGAGGTCAAGATGGTGTGCATCCGGCAGGCGACTATCGACGACCTGCTGGCGATGCAGGCGTGCAACTTGATGTGCCTGCCGGAGAACTACCAGATGAAGTACTACCTCTACCACATGCTGTCTTGGCCGCAGCTCCTCTTCGTCGCCGAGGACTACGGCGGCCGCATCGTCGGCTACGTGCTCGCCAAGATGGAGGAGGACCCCTCCGAGCCCTGCCACGGCCACATCACCTCCCTCGCGGTGCTCCGCTCCCACCGCAAGCTCGGGCTCGCCACCAAGCTCATGTCCGCCGCGCAGGCAGCCATGGACCAGGTCTTCGGCGCCGAGTACGTCTCCCTCCACGTCCGCCGATCCAACCGCGCCGCCTTCAACCTCTACACCTCCACTCTCGGGTACCAGATCCACGACATCGAGGCCAAGTACTACGCCGATGGAGAGGACGCGTTCGACATGCGCAAGCCTCTCCGGCAGCCGCAACCTAAGAAGCACCACCATCACCACCACCACGGCCCCGGTGGGTGCTGCTCCCACGACGCACCTACGGCGACGACTGGTTCTTCTCCTCAGTCTTTTAGTTCGCCGGATAAGAAGGCTAACACTTGACGGATGAAGCATATCTACAGAGAGGAGTCACCAAGCCCATTGGACTTCCGATACGCAGCTTTTTCTAATAGAATGGGAAACGAATTGTACTGTAATTGTTTGTGTACTTTACTTTGGCTCAATCGTCCGACCGTATCTTTGTAATCAGTGAGAATGGCAAGCAAATGTCCTTGACATCTATTGTTATTGTAAAAACATGTGTTATAACGCTGATTCTCAGATTACATTTGATTATTCGAGCTGACAATTTCTTCAGGTTTTATACAGCAGAATGTAATGCGCAATATTATTGTCGGATCACTCAAATTACGGAGAACTCCAGTGCCGAGATTTCTGAGTATCAATGCTAATTATTTCAAAAACAAA
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
ATTAACATCACCGAGACCTATCGCC...
ATTAACATCACCGAGACCTATCGCCGCAGAACCACCGAATCCACGGCATCGGAGAGTGTAGAGGTTAGTACTAGGCGGAGGTCAAGATGGTGTGCATCCGGCAGGCGACTATCGACGACCTGCTGGCGATGCAGGCGTGCAACTTGATGTGCCTGCCGGAGAACTACCAGATGAAGTACTACCTCTACCACATGCTGTCTTGGCCGCAGCTCCTCTTCGTCGCCGAGGACTACGGCGGCCGCATCGTCGGCTACGTGCTCGCCAAGATGGAGGAGGACCCCTCCGAGCCCTGCCACGGCCACATCACCTCCCTCGCGGTGCTCCGCTCCCACCGCAAGCTCGGGCTCGCCACCAAGCTCATGTCCGCCGCGCAGGCAGCCATGGACCAGGTCTTCGGCGCCGAGTACGTCTCCCTCCACGTCCGCCGATCCAACCGCGCCGCCTTCAACCTCTACACCTCCACTCTCGGGTACCAGATCCACGACATCGAGGCCAAGTACTACGCCGATGGAGAGGACGCGTTCGACATGCGCAAGCCTCTCCGGCAGCCGCAACCTAAGAAGCACCACCATCACCACCACCACGGCCCCGGTGGGTGCTGCTCCCACGACGCACCTACGGCGACGACTGGTTCTTCTCCTCAGTCTTTTAGTTCGCCGGATAAGAAGGCTAACACTTGACGGATGGTAAGATTTACCTCGCAAGCTCTGGATGTTGCATTATATACTAATATATTCCTGATCACTGCAGAGT
MNSDRQIQIYLCIIVSFFLVSRNHNYFLFRNLWFAFAQFKLKFWFVHLISCF
TCATTGGTTTGATGTTTATACCTTT...
TCATTGGTTTGATGTTTATACCTTTTCTTCTGCCTAGTGATTTACCATCAAAATAAATTACTTTGTGTGACTGCCAGTGATGATTAGTCTGCAAAATGGATGTCCTGTGGAAACATGGTACATAATATGACATCATTTGATAACACTGAGGCATTACAGAAGAACCCTATTTCCGTTCAGTTTTTGCTTCGTGCTCTGTTCTTTTATTCTGAAAGTTGAACTTTATCATAAAGCTTGGTTGAGGCAATATCAAAATCCAGGCCTCATCTTTCAGTGATGGTTCTGTCTGCAATATGGACTATGTATCCAAATCCAAGTCACCGCTTCAGGGAAAACCTCCTTGGAGAAACATCATCTAATATGATATGAATTCTGATAGACAGATACAGATATATCTATGCATTATTGTATCATTTTTTCTAGTTTCAAGGAATCATAATTATTTTCTATTTAGAAATCTTTGGTTTGCATTTGCCCAATTTAAGCTCAAATTCTGGTTTGTGCACTTAATAAGTTGCTTCTGAATCTTGCAGAAGCATATCTACAGAGAGGAGTCACCAAGCCCATTGGACTTCCGATACGCAGCTTTTTCTAATAGAATGGGAAACGAATTGTACTGTAATTGTTTGTGTACTTTACTTTGGCTCAATCGTCCGACCGTATCTTTGTAATCAGTGAGAATGGCAAGCAAATGTCCTTGACATCTATTGTTATTGTAAAAACATGTGTTATAACGCTGATTCTCAGATTACATTTGATTATTCGAGCTGACAATTTCTTCAGGTTTTATACAGCAGAA
MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLR
SHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKH
HHHHHHGPGGCCSHDAPTATTGSSPQSFSSPDKKANT
CCGAGACCTATCGCCGCAGAACCAC...
CCGAGACCTATCGCCGCAGAACCACCGAATCCACGGCATCGGAGAGTGTAGAGATGGTGTGCATCCGGCAGGCGACTATCGACGACCTGCTGGCGATGCAGGCGTGCAACTTGATGTGCCTGCCGGAGAACTACCAGATGAAGTACTACCTCTACCACATGCTGTCTTGGCCGCAGCTCCTCTTCGTCGCCGAGGACTACGGCGGCCGCATCGTCGGCTACGTGCTCGCCAAGATGGAGGAGGACCCCTCCGAGCCCTGCCACGGCCACATCACCTCCCTCGCGGTGCTCCGCTCCCACCGCAAGCTCGGGCTCGCCACCAAGCTCATGTCCGCCGCGCAGGCAGCCATGGACCAGGTCTTCGGCGCCGAGTACGTCTCCCTCCACGTCCGCCGATCCAACCGCGCCGCCTTCAACCTCTACACCTCCACTCTCGGGTACCAGATCCACGACATCGAGGCCAAGTACTACGCCGATGGAGAGGACGCGTTCGACATGCGCAAGCCTCTCCGGCAGCCGCAACCTAAGAAGCACCACCATCACCACCACCACGGCCCCGGTGGGTGCTGCTCCCACGACGCACCTACGGCGACGACTGGTTCTTCTCCTCAGTCTTTTAGTTCGCCGGATAAGAAGGCTAACACTTGACGGATGAAGCATATCTACAGAGAGGAGTCACCAAGCCCATTGGACTTCCGATACGCAGCTTTTTCTAATAGAATGGGAAACGAATTGTACTGTAATTGTTTGTGTACTTTACTTTGGCTCAATCGTCCGACCGTATCTTTGTAATCAGTGAGAATGGCAAGCAAATGTCCTTGACATCTATTGTTATTGTAAAAACATGTGTTATAACGCTGATTCTCAGATTACATTTGATTATTCGAGCTGACAATTTCTTCAGGTTTTATACAGCAGAATGTAATGCGCAATATTATTGTCGGATCACTCAAATTACGGA
Copyright © 2023 Grassius.org | Last updated: 2023-06-26